Dear friends of MassBank,

Update 8 February 2021: The new MassBank data release is available and deployed on MassBank Europe. The release version is 2021.02 with the DOI: 10.5281/zenodo.4506480. The whole MassBank content is available in NIST msp format for integration in mass spectrometry software. The MassBank_NIST.msp file contains all records to be used in vendors' software library search. We also provide a msp file in RIKEN format for integration in MS DIAL. Enjoy and report your experiences, please!

Update 20 July 2020: The MassBank developers and MassBank contributors are proud to be part of the GitHub Archive Programm. MassBank is now human code heritage as a long term and active open source community!

Update 16 March 2020: We are proud to announce the publication of new MS library related paper A European proposal for quality control and quality assurance of tandem mass spectral libraries. All related mass spectra are available HBM4EU library.

Update 09 March 2020: MassBank Europe is now on PubChem. See also on Twitter.


MassBank community on GitHub

Metabolomics Spectrum Identifier Resolver

The Metabolomics Spectrum Identifier Resolver is a tool for the high resolution imaging of mass spectra from GNPS/MassIVE, MetaboLights, MS2LDA and MassBank for publications and other purposes. For example MassBank Record: AC000372 resolves in metalolomics-usi-visulation of AC000372.

MassBank RESTful API

A basic RESTful API with simple search functions is available:

An improved API is in development. Your use cases and ideas for enhancements are appreciated.